In order to explore how to construct a new model of intellectual property compliance management that adapts to the laws of the digital economy, this article will comprehensively use institutional analysis and comparative research methods to systematically sort out the practical difficulties of intellectual property compliance management in the digital economy environment, and propose the theoretical framework of “embedded compliance”. It is believed that a new model of intellectual property compliance management should be collaboratively constructed from four levels: enterprises, industries, governments, and technologies. The concept of “embedded compliance”should be integrated into the linkage mechanism at all levels to promote a dynamic balance between innovation incentives and rights protection.